The institute is are self entitled and waist countless resources on pointless experiments when they could potentially do some good for the world. The minutemen have the right idea I am just not sure they have what it takes. I am leaning towards the brotherhood at the moment. They have the personnel, training, and resources to make a difference and Maxson so far seems like a pretty legit guy.
Definitely the institute. They can actually make a difference and I'm not talking about a difference like the minuteman who just help make a shitty life less shitty. I'm talking about actually shaping the entire future. They can make a world more advanced than even the pre war world